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RNA 结合位点预测软件合集
ZFNGenome: A comprehensive resource
for locating Zinc Finger Nuclease target sites in model organisms (2012)
Reyon, D.,
Kirkpatrick, J., Sander, J., Voytas, D., Joung, J., Dobbs, D., & Coffman,
C.
http://bindr.gdcb.iastate.edu/ZFNGenome/
RNABindR: Software for prediction of
RNA Binding Residues in proteins (2006)
Terribilini, M., Honavar, V. and
Dobbs, D.
http://bindr.gdcb.iastate.edu/RNABindR
PRIDB: The Protein-RNA Interaction
Database
Lewis, B.A., Walia, R.R., Terribilini,
M., and Dobbs, D.
http://bindr.gdcb.iastate.edu/PRIDB
ZiFiT: Software for engineering Zinc
Finger proteins for specific Targets (2006)
Sander, J., Voytas, D. and Dobbs, D.
http://bindr.gdcb.iastate.edu/ZiFiT
INDUS: Intelligent Data Understanding System (2005)
Caragea D., Silvescu, A., Pathak,
J., Bao, J., Andorf, C., Yan, C., Dobbs, D., & Honavar, V.
http://www.cild.iastate.edu/software/indus.html
PPIDB: Protein-Protein Interface
Database (2006)
Wu, F., Zaback, P., Yan, C., Pathak,
J., Dobbs, D., Honavar, V.
http://ppidb.cs.iastate.edu/